New tools for the analysis and validation of cryo-EM maps and atomic models

Afonine, P.V.; Klaholz, B.P.; Moriarty, N.W.; Poon, B.K.; Sobolev, O.V.; Terwilliger, T.C.; Adams, P.D.; Urzhumtsev, A.

doi:10.1107/S2059798318009324

Acta Crystallographica Section D
Acta Crystallographica
Section D STRUCTURAL BIOLOGY

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Figure 15
Illustration of multiple interpretation. (a) PDB entry 3J0R and the corresponding map (EMDB code 5352). (b) Ensemble of 100 perturbed models obtained using MD; all models in the ensemble deviate from the starting model by 0.5 Å. (c) Real-space refined models obtained from (b) using phenix.real_space_refine. (d) Distribution of model–map correlation for refined models. (e) Distribution of r.m.s. deviations between starting and refined models.

STRUCTURAL
BIOLOGY

ISSN: 2059-7983

Volume 74| Part 9| September 2018| Pages 814-840

https://doi.org/10.1107/S2059798318009324

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